libCellML Tutorials

Please follow the Installation instructions first to get yourself a copy of libCellML.

The first set is a simple starting point for users who are unfamiliar with CellML and/or modelling in general.

• Tutorial 1: Reading and writing CellML files
• Tutorial 2: Debugging, issue checking and validating
• Tutorial 3: Create a model and generate code using the API
• Tutorial 4: Using generated code to run a simulation
• Tutorial 5: Annotation tools
• Simple solver for generated models

The second set of tutorials below take the user progressively through different aspects of the libCellML functionality while building towards a model of Hodgkin and Huxley’s squid axon activation. It is aimed at users who are already familiar with the concept of CellML and modelling.

• libCellML Hodgkin-Huxley Tutorials
  • Hodgkin-Huxley 1: Creating a model using the API
  • Hodgkin-Huxley 2: Creating a model which uses imports
  • Hodgkin-Huxley 3: Debugging a model
  • Hodgkin-Huxley 4: Generating code from a model
  • Hodgkin-Huxley 5: Interact with generated code